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A list of all the posts and pages found on the site. For you robots out there is an XML version available for digesting as well.
Pages
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Posts
Future Blog Post
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Blog Post number 4
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Blog Post number 3
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Blog Post number 2
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Blog Post number 1
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
portfolio
Travel Award, Loyola University Chicago (2022)
Granted the Travel Award from Loyola University Chicago to attend and give a platform oral presentation at the American Society of Human Genetics 72nd Annual Meeting in Los Angeles, CA (2022).
Travel Award, Cohorts for Heart and Aging Research in Genomic Epidemiology Consortium Philadelphia Meeting (2022)
Granted the Travel Award to attend and present a poster at the Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium Meeting in Philadelphia, PA (2022).
Reviewers’ Choice Abstract Award, American Society of Human Genetics 71st Annual Meeting (2021)
Granted the Reviewers’ Choice Abstract Award at the American Society of Human Genetics 71st Annual Meeting.
Research Assistant Fellowship, Loyola University Chicago (2020-2023)
Granted the Research Assistant Fellowship from Loyola University Chicago, which included full tuition support and stipend, to conduct research at the graduate level at the Wheeler Lab under the supervision of Dr. Heather E. Wheeler.
Undergraduate Research Project Fellowship, Brazilian National Council for Scientific and Technological Development (2018-2020)
Granted the Undergraduate Research Project Fellowship from the Brazilian National Council for Scientific and Technological Development to conduct research at the undergraduate level at the Molecular and Computational Biology of Fungi Lab (Federal University of Minas Gerais), under the supervision of Dr. Aristóteles Góes-Neto.
publications
Exploring the relationship among divergence time and coding and non-coding elements in the shaping of fungal mitochondrial genomes
Published in Frontiers in Microbiology, 2020
Recommended citation: Paula L. C. Fonseca, Fernanda Badotti, Ruth B. De-Paula, Daniel S. Araújo, Dener E. Bortolini, Luiz-Eduardo Del-Bem, Vasco A. Azevedo, Bertram Brenig, Eric R. G. R. Aguiar, and Aristóteles Góes-Neto. "Exploring the relationship among divergence time and coding and non-coding elements in the shaping of fungal mitochondrial genomes." Frontiers in Microbiology 11 (2020): 765. https://doi.org/10.3389/fmicb.2020.00765
Comparative mitogenomics of Agaricomycetes: Diversity, abundance, impact and coding potential of putative open-reading frames
Published in Mitochondrion, 2021
Recommended citation: Daniel S. Araújo, Ruth B. De-Paula, Luiz M. R. Tomé, Gabriel Quintanilha-Peixoto, Carlos A. Salvador-Montoya, Luiz-Eduardo Del-Bem, Fernanda Badotti et al. "Comparative mitogenomics of Agaricomycetes: Diversity, abundance, impact and coding potential of putative open-reading frames." Mitochondrion 58 (2021): 1-13. https://doi.org/10.1016/j.mito.2021.02.002
Global characterization of fungal mitogenomes: new insights on genomic diversity and dynamism of coding genes and accessory elements
Published in Frontiers in Microbiology, 2021
Recommended citation: Paula L.C. Fonseca‡, Ruth B. De-Paula‡, Daniel S. Araújo‡, Luiz M. R. Tomé, Thairine Mendes-Pereira, Wenderson F. C. Rodrigues, Luiz-Eduardo Del-Bem, Eric R. G. R. Aguiar, and Aristóteles Góes-Neto. "Global characterization of fungal mitogenomes: new insights on genomic diversity and dynamism of coding genes and accessory elements." Frontiers in Microbiology (2021): 3733. ‡Contributed equally. https://doi.org/10.3389/fmicb.2021.787283
Genetic and environmental variation impact transferability of polygenic risk scores
Published in Cell Reports Medicine, 2022
Recommended citation: Daniel S. Araújo, and Heather E. Wheeler. "Genetic and environmental variation impact transferability of polygenic risk scores." Cell Reports Medicine 3, no. 7 (2022): 100687. https://doi.org/10.1016/j.xcrm.2022.100687
Phylogenomics and gene selection in Aspergillus welwitschiae: Possible implications in the pathogenicity in Agave sisalana
Published in Genomics, 2022
Recommended citation: Gabriel Quintanilha-Peixoto, Marina P. Marone, Fábio T. Raya, Juliana José, Adriele Oliveira, Paula L. C. Fonseca, Luiz M. R. Tomé, Dener E. Bortolini, Rodrigo B. Kato, Daniel S. Araújo, et al. "Phylogenomics and gene selection in Aspergillus welwitschiae: Possible implications in the pathogenicity in Agave sisalana." Genomics 114, no. 6 (2022): 110517. https://doi.org/10.1016/j.ygeno.2022.110517
Unraveling the Secrets of a Double-Life Fungus by Genomics: Ophiocordyceps australis CCMB661 Displays Molecular Machinery for Both Parasitic and Endophytic Lifestyles
Published in Journal of Fungi, 2023
Recommended citation: Thaís A. de Menezes, Flávia F. Aburjaile, Gabriel Quintanilha-Peixoto, Luiz M. R. Tomé, Paula L. C. Fonseca, Thairine Mendes-Pereira, Daniel S. Araújo et al. "Unraveling the Secrets of a Double-Life Fungus by Genomics: Ophiocordyceps australis CCMB661 Displays Molecular Machinery for Both Parasitic and Endophytic Lifestyles." Journal of Fungi 9, no. 1 (2023): 110. https://doi.org/10.3390/jof9010110
Multivariate adaptive shrinkage improves cross-population transcriptome prediction and association studies in underrepresented populations
Published in Human Genetics and Genomics Advances, 2023
Recommended citation: Daniel S. Araujo, Chris Nguyen, Xiaowei Hu, Anna V. Mikhaylova, Chris Gignoux, Kristin Ardlie, Kent D. Taylor, Peter Durda, Yongmei Liu, George Papanicolaou, Michael H. Cho, Stephen S. Rich, Jerome I. Rotter, NHLBI TOPMed Consortium, Hae K. Im, Ani Manichaikul, and Heather E. Wheeler. "Multivariate adaptive shrinkage improves cross-population transcriptome prediction and association studies in underrepresented populations." Human Genetics and Genomics Advances (2023): 100216. https://doi.org/10.1016/j.xhgg.2023.100216
Comparative genomics and stable isotope analysis reveal the saprotrophic-pathogenic lifestyle of a neotropical fungus
Published in mBio, 2024
Recommended citation: Luiz M. R. Tomé, Gabriel Quintanilha-Peixoto, Diogo H. Costa-Rezende, Carlos A. Salvador-Montoya, Domingos Cardoso, Daniel S. Araújo, Jorge M. Freitas, Gabriela B. Nardoto, Genivaldo Alves-Silva, Elisandro R. Drechsler-Santos, and Aristóteles Góes-Neto. "Comparative genomics and stable isotope analysis reveal the saprotrophic-pathogenic lifestyle of a neotropical fungus." mBio 15, no. 8 (2024): e01423-24. https://doi.org/10.1128/mbio.01423-24
talks
Platform oral presentation at the American Society of Human Genetics 72nd Annual Meeting
Published:
The presentation included preliminary results of the research I conducted during my MS in Bioinformatics while at Loyola University Chicago. Title of the work presented: “Multiadaptive shrinkage improves cross-population transcriptome prediction for transcriptome-wide association studies in underrepresented populations”. Click here to read the abstract.
teaching
TBA
TBA, TBA, 2000
TBA